Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHIKEVSKKTGITSDTIRYYERINLIPPIHRS-ESGIREFTQNDIDILEFVRYFRGAGVSVESLIDYIHLVEKGDSTIPARLEILKDERDNLEDRLQGLQEALNRLNHKIDNYQNKVVPREQELFDPTTK
1R8E Chain:A ((6-113))
YSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLE------MEELFAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDE
General information:
TITO was launched using:
RESULT:
Template:
1R8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48190 for 614 contacts (-78.5/contact) +
2D Compatibility (PS) -11494 + (NN) -4788 + (LL) -56
1D Compatibility (HY) -7600 + (ID) 950
Total energy: -73078.0 ( -119.02 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1R8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R8E-query.scw
PDB file :
Tito_Scwrl_1R8E.pdb
: