Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAG-----------NI-GFPASEV------------------------------------VQ--AADDKDILVMELSSFQLMG-VKEFRPHIAVITNLMPTHLDYHG-SFEDYVAAKWNIQNQMS-SSDFLVLNFNQGISKELAKTT-KATIVPFSTTEKVDGAYVQD-----KQ--LFYKG--ENIMLVDDIGVPGSHNVENALATIAVAKLA---GISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDN----TKVILIAGGLDRGNEFDELIPDIT-GLKHMVVLGESAS------RVKRAAQKA-G-VTYSDALDVRDAVHKAYEVA-----------QQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 2VOS Chain:A ((64-485)) | ---------------------------------------------------------------------------------------------------------------YPSIHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYREIEPLVALIDQQSQASPAMSKFEVLTAMAFAAFADAPVDVAVVEVGMGGRWDATNVINAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPSPDTVAVIGRQVPKVMEVLLAESVRADASVARED--SEFAVLRRQIAVGGQVLQLQGLGGVYSD-IYLPLHGEHQAHNAVLALASVEAFFGAQLDGDAVRAGFAAV-TSPGRLERMRS-APT-VFID-AAHNPAGASALAQTLAHEFDFRFLVGVLSVL-GDKDVDGILAALEPVFDSVVVTHNGSPRALDVEALALAAGERFGPDRVRTAENLRDAIDVATSLVDDAAADPDVAG--RTGIVITGSVVTAGAARTLFGRDPQ----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126740 for 2788 contacts (-45.5/contact) +
2D Compatibility (PS) -34510 + (NN) -14284 + (LL) 9388
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -178996.0 ( -64.20 by residue)
QMean score : 0.454
|
|
|