Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVYENKEELKKEISKTFEKYIMEFNNIPENLKDKRIDEVDRTPAENLSYQVGWTNLVLKWEEDERKGLQVKTPSDKFKWNQLGELYQWFTDTYAHLSLQELKAKLNENINSIYAMIDLLSEEELFEAHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL |
2HKV Chain:A ((6-138)) | ------QQALDRHVGVGVRTTRDLIRLIQPEDWDKRPISGKRSVYEVAVHLAVLLE-ADLRIATGATAD---EMAQ-F----Y----------AVPVLPEQLVDRLDQSWQYYQDRLMA----DFSTET-TYWGV------TDSTTGWLLE-AAVHLYHHRSQLLDYLNLLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13486 for 923 contacts (-14.6/contact) +
2D Compatibility (PS) -13280 + (NN) 366 + (LL) 3172
1D Compatibility (HY) 1200 + (ID) 650
Total energy: -22678.0 ( -24.57 by residue)
QMean score : 0.419
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