Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTDISVDELKKLTTVEAADAKVGTILEEGVSLPQKTNAQGLVVDA-LDSKSNVRYLYVEDLKNSPSNITK-AYAVPFVLELPVANSTGTGFL--SEINIYPKNVVTDEPKTDKDVKKLGQDDAGYTIGEEFKWFLKSTIPANLGDYEKFEITDKFADGLTYKS-VGKIKIGSKTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKADNPKPSNPPRKPEVHTGGKRFVKKDSTETQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKETKAPE---------GYVIPDKEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 3KPT Chain:A ((20-343)) | ----------------------------------------------------------------------------------------KAMAGAVFSLFKKDGTE-------------------------VKKELATDANGHIRVQGLE---YGEYYFQET--KAPKGYVIDPTKREFFVKNSGTINEDGTITSGTVVKMEVKNNEE--PTIDKKINGK-LEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPIV-KIDGA-EVNANVVEVAIE----GQKVTATVK--DFTKMDG---------------------KKE--FHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEK--ESKPVVVIPTTGIIELTKIDSANKNKMKGAEFVLKDNNGKIVVV-------------------AGKEVTGVSDENGVIKWSNIPYG----------DYQIFETKAPTYTKEDGTKTSYQLLKDPIDVKISENNQTVKLTIENNKS------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3357 for 2177 contacts (-1.5/contact) +
2D Compatibility (PS) -32657 + (NN) 4067 + (LL) 14372
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -33175.0 ( -15.24 by residue)
QMean score : 0.274
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