Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVITVKNDIEGGKIAFTLLEEKMKAGAQT------LGLATGSSPITFYEEIVK----SNLDFSNMVSINLDEYVGIAASNDQSYSYFMHKHLFDAKPFKENN--LPNGLAKDLKEEIKRY-DAVINANPIDFQILGIGRNGHIGFNEPGTPFDITTHVVDLAPSTIEANSRFFNS-IDDVPKQALSMGIGSIMKSKTIVLVAYGIEKAEAIASMIKGPITEDMPASILQKHDDVVIIVDEAAASKL
4R7T Chain:A ((1-247))
MRLIPLKAAAQVGKWAAAHIVKRINEFQPTAERPFVLGLPTGGTPLATYKALIEMHKAGEVSFKHVVTFNMDEYVGLAADHPESYRSFMYNNFFNHIDIQEENINLLNGNTDDHEAECKRYEDKIKSYGKINLFMGGVGNDGHIAFNEPASSLSSRTRIKTLTEDTRIANSRFFDGDINQVPKYALTIGVGTLLDAQEIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQEL
General information:
TITO was launched using:
RESULT:
Template:
4R7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149353 for 1910 contacts (-78.2/contact) +
2D Compatibility (PS) -25370 + (NN) -15325 + (LL) 0
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -212998.0 ( -111.52 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4R7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R7T-query.scw
PDB file :
Tito_Scwrl_4R7T.pdb
: