Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MIKINFPILDEPL------VLSNATILTIEDVSVYSSLVKHFYQYDVD------EHLKLFDDKQKSLKAT----ELMLVTDILGY-----DVNSAPILKLIHG--------DLENQF---------------------NEKPEVKSMVEKLAATITELIAFEC--LENELDLEYDEITILELIKALGVKIETQSDTIFEK-----CFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQK----------------SVLFLEPRRLYDLPQYV-IDKDYFLIGENMV----- |
| 4RKS Chain:A ((21-337)) | TYRSIGSTAYPTIGVVLLGGIANPVTRTPLHTSAGIAYSDSCGSIRSETRIYADEATHIYFNGTESTDDNRSVRRVLDRYSSVFEEAFGTKTVSYSSQNFGILSGSSDAGAASIGAAILGLKPDLDPHDVENDLRAVSESAGRSLFGGLTITWSDGFHAYTEKILDPEAFSGYSIVAFAFDYQRNPSDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKTNDIKGIFDLAQEDTEEYHSILRGVGVNVIRENMQKLISYLKLIRKDYWNAYIVTGGSNVYVAVESENADRLFSIENTFGSKKKMLRIVGGAWHRRPE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84480 for 1405 contacts (-60.1/contact) +
2D Compatibility (PS) -22677 + (NN) -1176 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 2050
Total energy: -113183.0 ( -80.56 by residue)
QMean score : 0.235
|
|
|