Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIEKTNRMNALFEFYAALLTDKQMNYIELYYA----DDYSLAEIAEESGVSRQAVYDNIKRTEKILEAYEMKLHMYSDYIVRSQIFDDILEKYTDDAFLQEKISILSSIDNRD
1L9Z Chain:H ((366-435))
---------SEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESRTRKLRD-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1L9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26093 for 387 contacts (-67.4/contact) +
2D Compatibility (PS) -7371 + (NN) -2584 + (LL) 3680
1D Compatibility (HY) 1600 + (ID) 50
Total energy: -30818.0 ( -79.63 by residue)
QMean score : 0.015
(partial model without unconserved sides chains):
PDB file :
Tito_1L9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L9Z-query.scw
PDB file :
Tito_Scwrl_1L9Z.pdb
: