Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLEERILKDGDVLGENILKVDSFLTHQVDFELMQEIGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVYSFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQDGRDLLEKTGVPVTSLARIKAFENGRVVFAEADA
1O57 Chain:A ((85-257))
-QTLGQSLANPERILPGGYVYLTDILG---KPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKD------GSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAE--GVDERLV---DEYMSLLTLSTINMKEKSIEIQNG
General information:
TITO was launched using:
RESULT:
Template:
1O57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147354 for 1345 contacts (-109.6/contact) +
2D Compatibility (PS) -18570 + (NN) -5297 + (LL) 1260
1D Compatibility (HY) -16400 + (ID) 2100
Total energy: -188461.0 ( -140.12 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_1O57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O57-query.scw
PDB file :
Tito_Scwrl_1O57.pdb
: