Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------MSKKDKKIEIQISDAQVTVNGTKVDGYQLVIGKKIVGQIAELDSKFAVIKGEQVSGFYKNLDQAMGNIIEEYNLNR-------------------------------------------------------------------------------------------------------------- |
| 4V0N Chain:B ((36-425)) | VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEEQPLVATTVITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRITVAGR--------DGKLYHIRNGELSQTIIQLEAQPVGLVR---LAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10995 for 346 contacts (-31.8/contact) +
2D Compatibility (PS) -7200 + (NN) -581 + (LL) 1088
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -22388.0 ( -64.71 by residue)
QMean score : 0.445
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