Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKVRRHFTDDFKQQIVDLYNVGRK--RSSLIKVYELTPSTFDKWVRQAK--TTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
2JN6 Chain:A ((1-97))
MPTK---TYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESCLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2JN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5216 for 481 contacts (-10.8/contact) +
2D Compatibility (PS) -9350 + (NN) 601 + (LL) 392
1D Compatibility (HY) 0 + (ID) 650
Total energy: -14223.0 ( -29.57 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2JN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN6-query.scw
PDB file :
Tito_Scwrl_2JN6.pdb
: