Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEAIIAKKAEQVELIAEKMKAAASIVVVDSRGLTVEQDTNLRRSLRESDVEFKVIKNSILIRAAEK-------AGLEDLKELFVGPSAVAFSNEDVIAPAKVISD------------------------------FAKDAEALEIKGGSVDGKFTSVEEINALAK----LPNKEGMLSML--------LSVLQAPVRNVAYAVKAVAEKDEEVA---
3JSY Chain:A ((9-221))
----MAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR-DKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADI
General information:
TITO was launched using:
RESULT:
Template:
3JSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66877 for 1061 contacts (-63.0/contact) +
2D Compatibility (PS) -17723 + (NN) -7092 + (LL) 532
1D Compatibility (HY) -10400 + (ID) 1550
Total energy: -103110.0 ( -97.18 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_3JSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JSY-query.scw
PDB file :
Tito_Scwrl_3JSY.pdb
: