Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSYFRNYWYRFGAILFIILAVI----LLVFRPD--WSMLHYLLYFNFMALLAHQFEEYQFPGGASPIINYVVYDEEELMDRFPGNTQSIMLVNTIAWLL-YIASIAFPQAYWLGLGVMFFSLTQLLGHGFQMNIKLKTWYNPGL-------ATTVFLLVPIACAYIYQA------SAEGMLTWGDWL-----GGFIMLIVCVLTSIIAPVQLLKDKKTNYIISPWQMDRFHKVINFVRIKK------------------------------- |
| 2WUQ Chain:A ((3-316)) | NSESLLRELRDALHEGGLTGSFLVRDLYTGEELGIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITTPGPTGLSRFRHPARVAVDDLLYLSTSVSDGTASDALFEITPPAQVEQMVREWGFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEALWAPVLTGPALPPEPAARLRELMAANLLRHRLAPDFASDAATWSSKTGTLLNLRHEVGVVEHADGQVFAVAVLTESQVPADSQPGAEALMAQVARRLRDRLREWHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233009 for 1760 contacts (-132.4/contact) +
2D Compatibility (PS) -22727 + (NN) 150 + (LL) 0
1D Compatibility (HY) 11600 + (ID) 700
Total energy: -244686.0 ( -139.03 by residue)
QMean score : 0.109
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