Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILREFCAENLTDLTRLDKAIISRVELCDNLA-AGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKAIDQLVALGFTRILLHGSSNGEPI-IENIKHIKALVEYANNRIEIMVGGGVT-AENYQYICQETGVRQAHGTRITQ
3QJA Chain:A ((76-242))
-----------KLAQAYQDGGARIVSVVTEQRRFQG---SLDDLDAVRAS---VSIPVLR------KDFVVQPY-------QIHEARAHGADMLLLIVAA----LEQSVLVSMLDRTESLGMTALV-----EVH--TEQEA-DRALKAGAKVIGVNARD--LMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAG-AGADAVLVGEGLV
General information:
TITO was launched using:
RESULT:
Template:
3QJA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110796 for 1258 contacts (-88.1/contact) +
2D Compatibility (PS) -17107 + (NN) -3403 + (LL) 3312
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -132294.0 ( -105.16 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3QJA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJA-query.scw
PDB file :
Tito_Scwrl_3QJA.pdb
: