Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKDQFIGVKQPLSKKLSQLVFILFFSLFTVFSVLVYTSATRYVLHREKINVGRSLEKTRVRLSQANSSLTSDDILEILYNQVFADDIYPHKRQNGIVRTGESIDSILYANQEMTLYDVNRKPVFSTLRTGMPTIGKSMGKVIISKVADMEGFVGTKAIYSQKTGQLLGYVQIFYNLGRYYSMRQNIIVFLIMMEVLGTVLALVVINSATKRIVRPVKNLHDLMHQISENPSNLEIRSKVRSEDEIGELSRIFDGMLDQLEDYTRRQSQFISDVSHELRTPVAVVKGHIGLLQRWGKDDPEILEESLAAAYHEADRMSLMINDMLNMIRVQGSLELHQDEVTDLSSSISVVIENFRILREDFQFIFENNISDIVWGKIY--KIHFEQALMILIDNAIKYSPSYKEVSVVLSVDNDFATVVVKDKGEGISDEDIEFIFDRFYRTDKSRNRESTQAGLGIGLSVFKQIMDAYHLKVDIKSELNQGTEFIVRIPIKKFEETKEI |
4BIZ Chain:C ((66-296)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNQMVTALERMMTSQQRLLSDISEELRTPLTRLQLGTALLRRRSGESKE-----LERIETEAQRLDSMINDLLVMSRNQQKNAL-VSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPW-PLYGNPNALESALENIVRNALRYS--HTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRES--GGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106831 for 1649 contacts (-64.8/contact) +
2D Compatibility (PS) -24894 + (NN) -7242 + (LL) 21216
1D Compatibility (HY) -10800 + (ID) 3850
Total energy: -132401.0 ( -80.29 by residue)
QMean score : 0.397
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