Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDIGIIVVSHSKNIAQGVVDLISEVA-KDVSITYVGGTEDGEIGTSFDQVQQIVEQ-----N--DKKTLLAFFDLGSAKMNLELVADFSEKNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK
3GDW Chain:A ((3-125))-ANVGVFVLMHGDSTASSMLKTAQELLGTS-IGTAMN----MPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDMGSLNSFGNMLFEETGIRTKAITMTSTMIVLEAIRMASVGRSLEDIYQNIQLSFESV


General information:
TITO was launched using:
RESULT:

Template: 3GDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84048 for 915 contacts (-91.9/contact) +
2D Compatibility (PS) -12792 + (NN) -6592 + (LL) 308
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -107024.0 ( -116.97 by residue)
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3GDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GDW-query.scw
PDB file : Tito_Scwrl_3GDW.pdb: