Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSKNPDNYMFLMHKISLTTNSGSLTLSGTNGPIIWEPCLDKPTDENNRFNLEKNEFSELKIFEITEEVEETYND-MMKLSWVEAISKSVIDFTNNIEAEKVDLREQQYLISAIEAWRALSRELGQSNTIQPYKKTAI-KMEDLI |
2DOQ Chain:D ((2-84)) | ---------------------------------------PLGSNEEANRFANQAKLRVQEAVFYIWSDKTLKYSQMA--------------------NDEAESFRNTWLLFRSFQQWITLTQTFKEQSRLADQAFLNKMFRK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DOQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15977 for 326 contacts (49.0/contact) +
2D Compatibility (PS) -8752 + (NN) -4285 + (LL) 3520
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 4260.0 ( 13.07 by residue)
QMean score : 0.214
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