Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKYQDDFYQAVNGEWAK-TAVIPDDKPRTGGFSDLADDIEALMLSTTDKWLADENKPSDTIL------NHFIAFHKMTADYQKREEVGVSPVLPLIEEYKGLQSFSEFASKVAEYELEGKPNEFPFGVAPDFMNAQLNVLWAEAPG---------IILPDTTYYSEDNEKGKELLAFWRKSQEDL--LPLFGLSEQEIKDILDKVLALDAKLAQYVLSREESSEYVKLYHPYNWEDFTKLAPELPLDAIFQKILGQKPDKVIVPEERFWTEFASDYYSESNWELLKADL-ILSAANAYNAYLTDDIRIKSGVYSRALSGTPQAMDKKKAAYYLASGPYNQALGLWYAGEKFSPEAKADVEHKIATMIDVYKSRLEKADWLAQSTREKAIMKLNVITPHIGYPEKLPETYTKKIIDPKLSLVENATNLDKISIAYGWSKWNKPVDRSEWHMPAHMVNAYYDPQQNQIVFPAAILQEPFYALEQSSSANYGGIGAVIAHEISHAFDTNGASFDEHGSLNNWWTDEDFEAFKKLTDKVVE-QFDGLESYGAK-----VNGKLTVSENVADLGGVACALEAAQRESDF-SARDFFINFATIWRMKARDEYMQMLASVDVHAPAQWRTNITVTNFEEFHKEFDVKDGDNMWRPVEKRVIIW |
| 4XGC Chain:C ((1-676)) | ----MQPFYEEYRKAWNQINDHIADLQHRS-----YARTLEQLVDFVVGQAERDEVLPTAALLTGINQPDHLSQFTALTQRLHAQR-----AAMVCVLQSRDCATLKAAVETLV-FGLVEDNAEVEQLRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILPDFECF--NASVLQDLILILSAHCGSLPFVLVLGVATA--------MTAVHGTLPYHVSSK------------IRLRVFQTQAAPTGLNEVLDKVL-------LSPKYAF--HLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFF--GGNAFALCTDYSKALGRIKQLTHEDMETIRRLPSFRPYVEQIND---CKRIIAVLTDDDYLKKKLPQLLRDCLLHFLLFRCSLEFLTELVGDLPRCP--------------------LGKLRRELYVNCLNRAIISTPEYKECLQMLSFLSKDEFVAKVNRALERTEQFLVEEIAPLE---LGEACTAVLRPKLEAIRLAVDEVG-------RALQKTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNII--GAPRAALHTALNNPHFPDLSVVYKLHLECGRMINLFDWLQAFRSVVPQIQARFTRAVAELQFLGYIKMSKRKT-DHATRLT------W |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48726 for 3938 contacts (-12.4/contact) +
2D Compatibility (PS) -56848 + (NN) -11667 + (LL) 5236
1D Compatibility (HY) -24800 + (ID) 4250
Total energy: -141055.0 ( -35.82 by residue)
QMean score : 0.241
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