Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKELITKQKTWEIILLVVSGILIPVILAIIKMKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQLTVENKGN------MKQAITEIIISQIKKV--ETHIPDIQLDG-------GFYEKFQKYLLIGYNNGNIESKVETIRLQVCS---VEQNTFCENLIDEIFSDDKIIDSGSVES----------------------IFLIDLKKYYSIFDNNKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKPHPRGLAGPGVEKLPLIDITKDVTKATAKT-HQILEQGANQVGFNILVDRT------------CILKYKVKIKS-GHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDN-----VVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK---------------------------------- |
| 4QIQ Chain:A ((7-470)) | -------SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39375 for 2619 contacts (15.0/contact) +
2D Compatibility (PS) -35127 + (NN) -1407 + (LL) 1012
1D Compatibility (HY) -24800 + (ID) 2500
Total energy: -23447.0 ( -8.95 by residue)
QMean score : -0.041
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