Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MQRFFHFLVWSLTSS-----ATFVFIGILSFFGLNQSIFLSIVYGLASGAAVYIAGIWNARRLFLKKHELTGREYAYIKKNLE------------EARQKMVRLRKALFQA-KSIQMFKQNAEMLRIVRRIYLLTKKEPKRFYQAERFFYQT-LDSVVELTEKYAFLSSHP-----------KKSKELSMSLSETRITLTELTKRLEEDLTQAMGDEIDELQFELDAAKHSLKK------------------------------------- |
| 1BGX Chain:T ((1-289)) | MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGDAVIVVFD-AKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADDVLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEG-YLITPAWLWEKYGL-RPDQWADYRALTGDESDNLPGVKGIGEKTARKLLEEWG-SLEALL---KNLD-RLKPAIREKILAHMDDLKLSWDLAKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38082 for 1198 contacts (-31.8/contact) +
2D Compatibility (PS) -19514 + (NN) 6744 + (LL) 704
1D Compatibility (HY) -2000 + (ID) 1650
Total energy: -53798.0 ( -44.91 by residue)
QMean score : 0.134
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