Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLPEENKEKAIQLAGQID-HKNMQSIVL-------YGSQAQSKLLNFSHDMINHVQKKDVGEIGEILGELMKKLEQVNPDD-LQSKKKGFLARMFGRVSSSLQEVLSKYQKTSVQIDRISLKLEHSKNALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTKTIPELKQQAESSDH---NQMAVQEVNDLIQFADRLD----------KRVHDLLLSRQ---ITIQSAPQIRLI--------QNTNQALAEKI----------QSSIVTAIPLWKNQVA----IALTLLRQRNAVDAQQKVSDTTN------ELLLKNA---------ELLKTNTIETARA----NERG-----------LVDIDTLKKVQESL-------------------ISTLEETLTIQEEGRIKRRQAEEELMMME--GDLKQKLITIKER---------- |
| 4TQT Chain:A ((14-490)) | ASKVIKGGTVITADRTFRADILIE-------DGKIAAIGDSLEGDEVIDASGCYVMP-----------GGIDPHTHLQMPFMGTYSSDDFDTGTAAALAGGTTMVVDFVLPDSEGNLLDALQEWFQKAGKARTDYSFHMAITGWNERTFNEMAEVVKRGIN------------TFHFMAYKGALMVNDDEMFASFQRCAELGAMPLVHAENGDI-VAQLQAKLMAEGNDGPEAHAYSRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQSHEAIRRARQKGMRVFGEPLIQHLTLDESEYHNRDWDYAARRVMSPPFRDKLNQDSLWAGLAAGSLQCVATDHCAFTTEQKRYGIGNFTKIPNGTGGLEERMPVLWTRGVRTGRLTPNEFVAVTSTNIAKILNIYPQKGAVVPGADADLVIWDPETTKKISAKTQHSSIDYNVFEGFELKGLPIMTLSRGRIAFDKGQVTAKPGDGRFIEREPNGAVNRALSQWKEIVAPRKVERSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 63528 for 2632 contacts (24.1/contact) +
2D Compatibility (PS) -36276 + (NN) 2035 + (LL) 2836
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: 18373.0 ( 6.98 by residue)
QMean score : 0.227
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