Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MEVTDVRLRRVNTDGRMRAIASITLDHEFVVHDIRVIDGNNGLFVAMPS-KRTPDGEFRDITHPINSSTRGKIQDAVLNE------YHRL--GDTEALEFEEAGAS---------
1TTW Chain:A ((3-120))
TYSSLLEEFATELGLEEIETNELGHGAVTIDKIWVVHLAPI--NEKELVAFMRAGILTGQSQLYDILRKNLFSPLSGVIRCALDKDDHWLLWSQLNINDTSGTQLASVLTSLVDKAVTLS
General information:
TITO was launched using:
RESULT:
Template:
1TTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13341 for 533 contacts (-25.0/contact) +
2D Compatibility (PS) -10321 + (NN) -3911 + (LL) 128
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -31545.0 ( -59.18 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1TTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TTW-query.scw
PDB file :
Tito_Scwrl_1TTW.pdb
: