Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAP-------KLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVEL------------------------------------VLNWTPK---LQSLSTLFAK----------LSTGGITPTGPAIREATLQFEKI----RSRRGMLADDERRFDEFGM |
2WW8 Chain:A ((222-390)) | ---------------------------------------------------------------------------------------------------------------------------------SVPLDVVILLDNSNSMSNIRNKNARRAERAGEATRSLIDKITSD-SENRVALVTYASTIFDGTEFTVEKGVADKNGKRLNDSLFWNYDQTSFTTNTKDYSYLKLTNDKNDIVELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEILTQQARQNSQKVIFHITDGVP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31638 for 770 contacts (-41.1/contact) +
2D Compatibility (PS) -11462 + (NN) -3825 + (LL) 10292
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -42183.0 ( -54.78 by residue)
QMean score : 0.401
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