Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDKGFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRR----NTPEGSFRLKSHHYLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYG-SQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
3CSW Chain:A ((14-281)) | LIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFK---QEVRIKVYLFPDSGE------------VLFVFSPLNIP---DLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREI-VDC-YDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFEPFVLNLEEN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147459 for 2097 contacts (-70.3/contact) +
2D Compatibility (PS) -28301 + (NN) -11541 + (LL) 1016
1D Compatibility (HY) -16000 + (ID) 3350
Total energy: -205635.0 ( -98.06 by residue)
QMean score : 0.504
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