Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIW---------GTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIF----STIIPVFLAFFLGYLGFQVGFKKKDE----------------LISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFLEGVIVIPQ----FVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIEVEIYEGDFEDIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQ---GVAYLDDGTMIVV-EEGRNYIGKHIDVLVTSVLQTAA------GRMIFAKPKLLEKAL---- |
| 3OKG Chain:A ((15-412)) | MTEGPYK--------------LPPGWRWVRLGEVCLPTERRDPTKNPSTYFVYVDISAIDSTVGKIVSPKEILGQHAPSRARKVIRSGDVIFATTRPYLKNIALVPPDLDGQICSTGFCVIRANREFAEPEFLFHLCRSDFITNQLTASKMRGTSYPAVTDNDVYNTLIPLPPLEEQRRIVAKVEALMERVREVRRLRAEAQKDTELLMQTALAEVFPHPGADLPPGWRWVRLGEVCDIIMGQSPPSSTYNFEGNGLPFFQGKADFGDLHPTP---RIWCSAPQKVAR----PGDVLISVRAPVGSTNVANLACCIG--RGLAALRPRDSLERFWLLYYLHYLEPELSKAITKKDLQNVFIPLPPLEEQRRIVAYLDQIQQQVAALKRAQAETEAELKRLEQAILDKAFRGDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168396 for 2440 contacts (-69.0/contact) +
2D Compatibility (PS) -36153 + (NN) -493 + (LL) 1896
1D Compatibility (HY) 2800 + (ID) 1750
Total energy: -202096.0 ( -82.83 by residue)
QMean score : 0.124
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