Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVME--NMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELR-------SGARIRV--------GEK----------KEDALDFALWKAAK--------EG----EISWD-SPWGKGRPGWHIEC--------SAMVK--KY-------L-GDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSV-HYRHPINYSEELLENTK--SAFSRLKTAYSNLQHRLNSSTNL--------TEDDDQWLEKVEEHRKAFEEEMDDDFNTANAISVLFDLAKHANYYLQKDHTAD------HVITAFIEMFDRIVSVLGFSLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQGTRWKRGE |
| 4PY2 Chain:A ((26-506)) | ----------------------KYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSARKEGITPRDLADRNTSAFRRMAEVLNSS-NDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSVRDE-AY--YGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENNP-GFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALGYPDTTDERWAYWPANAHIIGKDISRFHAVYWPAFLMSA-QLPLPKRVFAHGFLFNR-----------IDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMD-DQALHLALGAIFAVVAEANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQP--FIPQSAEKLLDILAVPADKRQFA----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -167435 for 3034 contacts (-55.2/contact) +
2D Compatibility (PS) -42555 + (NN) -21239 + (LL) 4656
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -237973.0 ( -78.44 by residue)
QMean score : 0.428
|
|
|