Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAER-HPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGV-EKIIDNVTKQVSGGDIILLHASDSA-KQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK
2C71 Chain:A ((5-195))
--------------------------------------------------------KLVALTFDDGPDNVLTARVLDKLDKYNV-KATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNV---DLV-FVGGLTANDWIPSTTAEQRAAAVINGVRDGTIILLHDVQPEPHPTPEALDIIIPTLKSRGYEFVTLTELFTLKGVP-----
General information:
TITO was launched using:
RESULT:
Template:
2C71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64482 for 1578 contacts (-40.9/contact) +
2D Compatibility (PS) -20230 + (NN) -10356 + (LL) 6004
1D Compatibility (HY) -13200 + (ID) 2400
Total energy: -104664.0 ( -66.33 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_2C71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C71-query.scw
PDB file :
Tito_Scwrl_2C71.pdb
: