Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPVFPLILSAVLFLSCFFGARQTEASASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTDDYQ--KASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAARSRINAYQTGSIIGKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ------DIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMG-FNGVIVTDALNMKAIADHF--GQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQT----AS--------IEQTIHDLIKRKKIKPVSL----SKMNF---------------------ASQVFKTEHEKQVKEADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKAALQHNKPFVLMSL-RNPYDAANFE-EAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDIPSVTK--P-----------------------------GNTLYPLGYGLNIKTGRPL |
3U48 Chain:A ((3-623)) | ------------------------------MNQFINALMAKMTLDEKIGQLNLPGAGDITTG--------QASSSGIAQKIKEGKVGGLFNIK----SVTKIKEVQRIAVEESR-LKIPLLFGMDVIHGY------ETAFPIPLGLSCTWDMELIEKSARIAAIEASADGICWTFSPMVDISRDPRWGRVS-EGSGEDPYLGAQIAKAMVKGYQGKDFSDNTSIMACVKHFALYGAGEAGRD--YNTVDMSRVRMYNEYFPPYKAAVDAGVGSVMTSFN---EIDG-------------IPATGNKWLMTDVLRKRIGAFKGFVVTDYTAINEMIDHGMGDLQTVSALALRAGVDMDMVGEG------------FLTTLKKSLQEGKITQAQIDAACKRILEAKYKLGLFSDPYKYCN---EERARTQIFTPEHRKIAREIAAQSFVLLKNDNNVLPLKKS--GTIALVGPLADNRVNMPGTWSVAAKHAESVSLLEGLKKAAGNDARILYAHGSNLDEDKSLIERATMFGKTLKYDPRPKDVVIKEAVDIANQADVIVAALGESAEMS--GEASSRSNIE-----IPALQRELLQALLKTGKPVVLVLFTGRPLALTWEHENVPAILNVWFAG--------TEAGDAISDALFGVVNPSGKLSATFPRNVGQVPIYYNHKNTGRPLPEGQWFQKFRSNYLDVPNDPLYPFGYGLSFTKFT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133122 for 4992 contacts (-26.7/contact) +
2D Compatibility (PS) -58355 + (NN) -28874 + (LL) 6276
1D Compatibility (HY) -26800 + (ID) 6700
Total energy: -247575.0 ( -49.59 by residue)
QMean score : 0.466
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