Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSA-----TDPTFALGWRRNGSKSME----------WMFG-----------PHASENAYGHTGWT---GTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 4WZ4 Chain:A ((5-346)) | ----------------------------------------------RLKALVDAAVQPVMKANDIPGLAVAISLKGEPHY-FSYGLASK-------EDGRRVTPETLFEIGSVSKTFT-ATLAGYALTQDKMRLDDRASQHWPALQGS------RFDGISLLDLATYTAGGLPLQFPDS-------VQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDVPEAA--LAQYAQ----GYGKDDR-------------PL----RVGPGPLDAEGYGVKTSAADLLRFVDANLHPE------RLDRPWAQALDATHRGYYKVGDMTQGLGWEAYDWPISLKRLQAGNSTPMALQPHRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILANRNYPNA-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116921 for 2668 contacts (-43.8/contact) +
2D Compatibility (PS) -33359 + (NN) -15854 + (LL) 7896
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -168388.0 ( -63.11 by residue)
QMean score : 0.489
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