Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGKPY-PEELSSEQWILVMQKLAAHGVADITLTGGE-AKLIKG---FKELVVVASSL-FTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMD-NTHDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTINE-SNADEVSDVVEQCANAGAFIFRAGKTLSVGRATEGFKALDIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 3T7V Chain:A ((60-242)) | ---------------------------------------------------------------------------------------------------------FLNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPI--MISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRV-GQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQ------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68484 for 1306 contacts (-52.4/contact) +
2D Compatibility (PS) -18998 + (NN) -9742 + (LL) 16540
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -89684.0 ( -68.67 by residue)
QMean score : 0.483
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