Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTDILAQTPYVLKQLRPTKAKKEKEKVRFQQEIKLLKNIHHPQIPGFIDEFIIDGQAYYVMQFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDIRTPNIIIND----GRLCLIDFGLAKQLTPE---------E--------MEEIKVRKQDDFFDLGETLLFLLYSQYK--GKKK---------KNGTWLE--ELTLTKEVTLLLKRLLGIEEE-YQHTASIREDLNRAIQSVT |
| 3SOA Chain:A ((8-268)) | -------------------RFTEEYQLFEELGKG--SVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119447 for 1592 contacts (-75.0/contact) +
2D Compatibility (PS) -23926 + (NN) -9477 + (LL) 2616
1D Compatibility (HY) -13600 + (ID) 2450
Total energy: -166284.0 ( -104.45 by residue)
QMean score : 0.480
|
|
|