Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYGIYMDRPLSQEENERFMSFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQ---LDKSDIRFSTQEYGKPCIPDL-PDAHFNISHSGRWVICAFDSQPIGIDIEKTKPISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSIELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELL
5CXD Chain:A ((26-116))----------------PKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGHVAFNDIDCYNDELGKPKIDYEGFIVHVSISHTEHYAMSQVV----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 293 -39971 -136.42 -475.85
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -136.42
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_5CXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CXD-query.scw
PDB file : Tito_Scwrl_5CXD.pdb: