Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKISFSESQKLFAYFSGLIAALSLFIYYVSAQQSEGALILCITFGVIAAGIWFGPIYALAVTLIVLFVLGTLMMFFQTGQTSLFPAEEGLRMLVVWGIALLLFSFISGRIHDITAELRRSMTRLQSEIKSYVAVDRVTGFDNKQRMKLELSEEIKRAERYGNSFVFLLLHMHY---FKEFKSLYGEKETDRLFQYVGQQIRTSVRETDKKFRPSDERIGIVLTHTPAEHMPAVLTKLKKQLDTYQLENGKYVSLTFHVCYLPYRNDIQTAD-QFLEELENEMMMNEL
3HVW Chain:A ((175-313))--------------------------------------------------------------------------------------------------------------------------------------------YNRLRLQEDVSLRLQR----DGALTVIAADLLPLALLNTIIRTLGYPFSNDLMLEARDRIRAELPD-FTLYKISPTRFGLLLPRQQQEETESVCLRLLRAFESPVVCRGIPIKANVGLGVLPLADDTLDGDQDWLRLVVSAADD---


General information:
TITO was launched using:
RESULT:

Template: 3HVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 577 -90159 -156.25 -667.84
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -156.25
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_3HVW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HVW-query.scw
PDB file : Tito_Scwrl_3HVW.pdb: