Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQLKWRTVNPEETKAIAKLTAAFAKPGDVLTLEGDLGAGKTTFTKGFAEGLGITRIVNSP-------TFTIIKEYNDGVLPLYHMD------VYRMEDESEDLGLDEYFHGQGVCLVEWAHLIEEQLPQERLQIVIKRAGDDEREITFTAVGNRYEMLCEELSRHDNISN---
1A5T Chain:? ((1-172))MRWYPWLRPDFEKLVASYQA----GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAAL----LTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP


General information:
TITO was launched using:
RESULT:

Template: 1A5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 674 -71657 -106.32 -477.71
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -106.32
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_1A5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A5T-query.scw
PDB file : Tito_Scwrl_1A5T.pdb: