Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAARWHNQ-KDIRIEHIEEPKTEPGKVKIKVKWCGICGSDLHEYLGGPIFIPVDKPHPLTNETAPVTMGHEFSGEVVEVGEGVENYKVGDRVVVEPIFATHGHQG----AYNLDEQMGFLGLA----GGGGGFSEYVSVDEE-LLFKLPDELSYEQGALV-EPSAVALYAVRS-S-KLKAGDKAAVFGCGPIGLLVIEALKAAGATDIYAVELSPERQQKAEELGAIIV-DPSKTDDVVAEIAERTG-GGVDVAFEVTGVPVVLRQAIQSTTIAGETVIVSIWEKGA-EIHPNDIVIKERTVKGIIGYR-DIFPAVLSLMKEGYFSADKLVTKKIVLDDLIEEGFGALIKEKSQVKILVRPN
3JV7 Chain:A ((1-345))MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ---------YAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIG-DLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAG--AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFM-IPFGASVVTPYWGTRSELMEVVALARAGRLDI---HTETFTLDEGP-AAYRRLREGSIRGRGVVVP-


General information:
TITO was launched using:
RESULT:

Template: 3JV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1987 -216765 -109.09 -660.87
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -109.09
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_3JV7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JV7-query.scw
PDB file : Tito_Scwrl_3JV7.pdb: