Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------MNAEEKKGLQRAIEEITEIAKGFGLDFYPMR---------YEICPAEIIYTFGAYGMPTRFSHW-SFGKQFHKMKLHYDL-GLSKIYELVINSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQNTKRDMVESMAATAERI------KHYEQVHGI--------KEVESFLDAIL------SIQEHIDPSLVRPKLQWSVDDEEEEIEEAATPYDDLW---SLDEKKPKKQVKKSKKPFPPRPE----------KDILLFIEEHSRELEPWQRDILTMMREEMLYFWPQLETK------------------------------------IMNE----------------------------------GWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINPYYLGLKIFEDIEKRYNNPTEEMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMREDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLTVNDGDYMKNNELYIKHWYEGIELDLKYLE-KVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL------------------------
4XMM Chain:D ((47-744))ILVPMTVNDQPIEKNGDKMPLKFKLGPLSYQNMAFITAKDKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDDRVFNVVNSNFAKEHNATVNLAMEAILNELEVFIGRVKDQDGRVNRFYELEESLTVLNCLRTMYFILDGQDVEENRSEFIESLLNWINRSDGEPDEEYIEQVFSVAGKKVFETQYFWKLLNQLVLRGLLSQAIGCIERSDLLPYLSDTCAVSFDAVSDSIELLKQYPKDSSSTFREWKNLVLKLSQAFGSSATDISGELRDYIEDFLLVIGGNQRKILQYSRTWYESFCGFLLYYIPSLELSAEYLQMSLEANVVDITNDWEQPCVDIISGKIHSILPVMESLDSCTAAFTAMICEAKGLIENIFEGLEDLFSYRNGMASYMLNSFAFELCSLGDK--ELWPVAIGLIALSATG--TRSAKKMVIAELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNIESIANFSLVKSYSWLLFEASCMEGQKVLNAIVSKDDVIIPQDILVTNSMRQTLAPYAVLSQFYDREDWGQALRLLLLLIEFHYLVLLVAKFLYPIFEDSVATVIEVIETKWSNLYETIIEADKSATLLKNLRKKLNFKLCQAFM


General information:
TITO was launched using:
RESULT:

Template: 4XMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1486 -122472 -82.42 -263.95
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : -82.42
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.179

(partial model without unconserved sides chains):
PDB file : Tito_4XMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XMM-query.scw
PDB file : Tito_Scwrl_4XMM.pdb: