Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------MNKDKLRYAILKEIFEGNTPLS-----ENDIGVTEDQFDDAVNFLKREGYIIGVHYSDDRPHLYKLGPELTEKGENYLKENGTWSKAYKTIKEIKDWIK--------------------------------------------
4NB5 Chain:A ((15-159))DIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRP-------------NAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQ


General information:
TITO was launched using:
RESULT:

Template: 4NB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 249 -29987 -120.43 -370.21
target 2D structure prediction score : 0.86
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -120.43
2D Compatibility (Sec. Struct. Predict.) : 0.86
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.672

(partial model without unconserved sides chains):
PDB file : Tito_4NB5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NB5-query.scw
PDB file : Tito_Scwrl_4NB5.pdb: