Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKYQYEFPLDKAGKAGAVKPYRGGKNDFVTPVSNLSGVAEILTNAALKATEAYSQLGQDRLGAVLISKVKGWAYADREGTLFIEESDNNNVWTTTAAVNVAAGVLTATDWVYLSKRYYRFRYVNGNLQQSEFVLYQSVGAGEMDVRVNEKTPLQIDFAENQTHDGRLKVEARKTFDFVFHENAESASEGAALPVDGAAHLLVEVYGTAEMSEVKFWGKSVSGQKLPIRGVKTDDATTASSTLGKAEAWAFDIKGFKEIIMEIISITGGTLSVKGTAVS
5FIK Chain:W ((10-226))ITPVILGLPLVTLIVLFPSLLFPTSNR--------------LVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLP------------------------HSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANIT---AGHLLIHLIGGATLAL-----MSISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNT----------------


General information:
TITO was launched using:
RESULT:

Template: 5FIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 902 -43954 -48.73 -202.55
target 2D structure prediction score : 0.22
Monomeric hydrophicity matching model chain W : 0.59

3D Compatibility (PKB) : -48.73
2D Compatibility (Sec. Struct. Predict.) : 0.22
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.021

(partial model without unconserved sides chains):
PDB file : Tito_5FIK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FIK-query.scw
PDB file : Tito_Scwrl_5FIK.pdb: