Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKVERLLINYKTLEEFKKFKEYGIQELSMLEELQDNIIENDSTSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELWKLEVLPGYQNRGYGRALVEFAKSF-----KMP---IRTNPRMK-SAEFWNKMNFKTVKYDMARDKGENPLIWHPDMDREMTPGESA
3DSB Chain:A ((55-148))--------------------------------------------GKYHVYTVFDKVVAQIMYTYEWSDW-----RNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYN--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 250 -47235 -188.94 -555.70
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -188.94
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_3DSB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DSB-query.scw
PDB file : Tito_Scwrl_3DSB.pdb: