Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAISTFAPQKNVQLELE
4NL3 Chain:E ((8-72))-----LQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVAL---


General information:
TITO was launched using:
RESULT:

Template: 4NL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 233 -41303 -177.26 -635.42
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain E : 0.89

3D Compatibility (PKB) : -177.26
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_4NL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NL3-query.scw
PDB file : Tito_Scwrl_4NL3.pdb: