Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRKILLSSA--LSFGMLISAVPALAAGTSSEVAVKNEEY--------DYDTIYRISPLPMDFQP-TIEY--NGYTYTLTRH-YFDYSIGFYTAIYTKVV----
3NBM Chain:A ((5-108))-KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKSPSKALQFVLEHYQ


General information:
TITO was launched using:
RESULT:

Template: 3NBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 340 -17900 -52.65 -208.14
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -52.65
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.329

(partial model without unconserved sides chains):
PDB file : Tito_3NBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NBM-query.scw
PDB file : Tito_Scwrl_3NBM.pdb: