Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIHTYEKEFFDLLKRISHYSEAVALMHWDSRTGAPKNGSEDRAESIGQLSTDIFN-----------IQTSDRMKELIDVLYERF-DDLSEDTKK----AVELAKKEYEENKK-----------IPEAEYKEYVI--LCSKAETAWEEAKGKSDFSLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDLFEP------GVTVKVLDQLFAELKEAII----PLVKQVTASGNK-P------D-------------T----------SF------------ITKAFPKEKQKELSLYFLQELGYDFD-GG--------RLDETVHPFATTLN----RGDVRVTTRYDEKDFRTAIFGTIHECGHAIYEQNIDEALSGTNLSDGASMGIHESQSLFYENFIGRNKHFWTPYYKKIQEASPVQFKDISLDDFVRAINESKPSFIRVEADELTYPLHIIIRYEIEKAIFSNEVSVEDLPSLWNQKYQDYLGITPQTDA----EGILQDVHWAGGDFGYFPSYALGYMYAAQLKQKMLEDLP---EFDALLERGEFHPIKQWLTEKVHIHGKRKKPLDIIKDATGE-ELNVRYLIDYLSNKYSNLYLL
1R42 Chain:A ((24-593))----QAKTFLDKFNHEAEDLFYQSSLASWNYNTNITEENVQNMNNAGDKWSAFLKEQSTLAQMYPLQEIQNLTVKLQLQALQQNGSSVLSEDKSKRLNTILNTMSTIYSTGKVCNPDNPQECLLLEPGLNEIMANSLDYNERLWAWESWRSEV-GKQLRPLYEEYVVLKNEMARANHY-EDYGDYWRGDYEVNGVDGYDYSRGQLIEDVEHTFEEIKPLYEHLHAYVRAKLMNAYPSYISPIGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNIDVTDAMVDQAWDAQRIFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCTKV--TMDDFLTAHHEMGHIQYDMAYAA--QPFLLRNGANEGFHEAVGEIMSLS-AATPKHLKSIGL-LSPDFQ-------EDN-ETEIN----FLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVGVVEPVPHDETYCDPASLFHVSN--DYSFIRYYTRTLYQFQFQEALCQAAKHEGPLHKCDI-SNSTEAGQKLF-NMLRLGKSEPWTLALENVVGAKNMNVRPLLNYFEPLFT-----


General information:
TITO was launched using:
RESULT:

Template: 1R42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1806 36357 20.13 77.68
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 20.13
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1R42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R42-query.scw
PDB file : Tito_Scwrl_1R42.pdb: