Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVTVPHKVSIMDYLDHIDESAKVLGAVNTVRREGDKLVGYNTDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPKKFDICNR----------TLEKAKRLTEATPSFHNKEVLSIKEAEE-RLEQYDVIIHT--TSVGMYPNVDDVPL-SLQRAASSAVVCDIVYNPIQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKLGGTEC
3TNL Chain:C ((38-315))--ELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGK-KMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDC-----KAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF--------


General information:
TITO was launched using:
RESULT:

Template: 3TNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1510 -74886 -49.59 -283.66
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -49.59
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3TNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TNL-query.scw
PDB file : Tito_Scwrl_3TNL.pdb: