Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKKVIVLGEIRDGELRNVTFEAIAAGRTISGDGEVIGVLIGENVQS-IAQELIHYGADKVLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAMGKDLSPKLAARLQTGLISDAIDVSVTGGNVVFTRPIYSGKAFERVISTDPMIFATIRPNNIQASEKDTSRSGSIESIDVSLTDLRTVIQEVVKKTADGVDLSEAKIIVAGGRGVKSKEGFQPLQELAEVLGAAVGASRGACDADYCDYALQIGQTGKVVTPDLYIACGISGAIQHLAGMSNSKVIVAINKDPEADIFKIADYGIVGDLFEVVPLLTEEFKQLNIHS
1EFV Chain:A ((2-313))--QSTLVIAEHANDSLAPITLNTITAATRLGG--EVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPD---TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGS-ASSEKASSTSPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK------


General information:
TITO was launched using:
RESULT:

Template: 1EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1811 -20392 -11.26 -65.57
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -11.26
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_1EFV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EFV-query.scw
PDB file : Tito_Scwrl_1EFV.pdb: