Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIVSGQLLRPQDIENWQIDQDLNPLLKEMIETPVQFDYHSIAELMFELKLRMNIVAAAKTLHKSGAKFATFLKTYGNTTYWRVSPEGALELKYRMPPSKAIRDIAENGPFYAFECATAIVIIYYLALIDTIGEDKFNASFDRIILYDWHYEKLPIYTETGHHFFLGDCLYFKNPEFDPQKAQWRGENVILLGEDKYFAHGLGILNGKQIIDKLNSFRKKGALQSAYLLSQATRLDVPSLFRIVR
4Q95 Chain:A ((9-36))-----------------------------------------------------------------------------------------------------------------------------------------------------------------PEPKPGDLIEIFRPFY--------RHWAIYVGDGYV------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q95.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 52 -10558 -203.04 -377.07
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -203.04
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_4Q95.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q95-query.scw
PDB file : Tito_Scwrl_4Q95.pdb: