Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSFRFTKMHGLGNSYIYVNQFEEQLPEEKLSEIAIQVSSVYTGIGSDGMILICPS-DQAPVKMRIFNNDGSEGKNCGNGLRCVAKYAYEHKLVE-ETSFLIETLSGLVKAEVQVENGKVNVVTVDMGEPRLTKSELPMLDGGEE---HTINETMAFGEVELTGTAVSMGNPHIVFPIADIEQ------APLTTLGPVIEKDPRFPEGINVEFVETVNEQELHFRVWERGSGITQACGTGACAAAVASVLNGVSKRNQDITVHLAGGDLVINWKDN-GHVMMTGPAETVCEGVYFL
3EJX Chain:A ((25-311))-GVLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQD----DGQVKVDMGTPILKAQDVPT-KLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRAD--RKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL


General information:
TITO was launched using:
RESULT:

Template: 3EJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1740 -40832 -23.47 -148.48
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -23.47
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3EJX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EJX-query.scw
PDB file : Tito_Scwrl_3EJX.pdb: