Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKEAGPFPVKKEQFRMTVNGQAWEVAAVPTTHLSDLLRKEFQLTGTKVSCGIGRCGACSILIDGKLANACMT-MAYQADGHSITTIEGL-QKEELDMCQTAFLEEGGFQCGYCTPGMIIALKALFRETPQPSDKDIEEGLAG--NLCRCTGYGGIMRSACRIRRELNGGRRESGF
3FC4 Chain:A ((3-163))--------------QKVITVNGIEQNLFVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTIEGVGQPENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADPSREDVRDWFQKHRNACRCTGYKPLVDAVMDAAAVINGKKPET--


General information:
TITO was launched using:
RESULT:

Template: 3FC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 824 -55003 -66.75 -350.34
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -66.75
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_3FC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FC4-query.scw
PDB file : Tito_Scwrl_3FC4.pdb: