Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYA----ISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCG-SPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
4UXJ Chain:D ((12-182))-------GRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKY------------------LRAQAAVSQLTEVRDTWKRF----DVLAIDEGQFF-SDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQE------LIGGADMYIATCR-----------


General information:
TITO was launched using:
RESULT:

Template: 4UXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 724 -15093 -20.85 -101.98
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain D : 0.76

3D Compatibility (PKB) : -20.85
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_4UXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UXJ-query.scw
PDB file : Tito_Scwrl_4UXJ.pdb: