Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPP------------PWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPD-----------------PDASLGCGDGSPAEAYASELPDLSGPTPRAPQ-----RNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRR------IDPWSTLKVSLL------LSVALFFVWMITVAFLYLV-LGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGG-------AFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD---------------------------------------------------------------------------------------- |
| 1T8S Chain:A ((8-484)) | LTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDENARKQGLFVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYGAHISVQPSQHEIPYPYVILDRSMSAGLTRYFPTTFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYT--RYVDEFVRWGCSQILDPDSPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRE-SQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17982 for 1852 contacts (9.7/contact) +
2D Compatibility (PS) -30970 + (NN) -2816 + (LL) 180
1D Compatibility (HY) -800 + (ID) 1350
Total energy: -17774.0 ( -9.60 by residue)
QMean score : 0.053
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