Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTR-SEQLDAILRKIRQRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGDEPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFTATPLPLALAKLFWTARFNTSQPCEGQTF---- |
3NOY Chain:A ((10-358)) | -------MIQKRKTRQIRVGNVKIG-------GDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKK-------------SPMPVIADIHFAPSYAFLSMEKGVH-------GIRIN-----PGNI--------GKEEIVREIVEEAKRRGV-AVRIGVNSGSLEKDLLEKYGYP---------SAEALAESALRWSEKFEKWGFTNYKVSIKGSD----------VLQNVRANLIFAERTDVPLHIGITEAGMGTKGIIKSSVGIGILLY-----MGIGDTVRVSLTDDPVVEVETAYEILKSLGLRRRG----------------------VEIVACPTCGRIEVDLPKVVKEVQEKLSGVKTPLKVAVMGCVVNAIGEA----------READIGLACGRGFAWLFKHGKPIKKVDESEMVDELLKEIQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25263 for 2905 contacts (8.7/contact) +
2D Compatibility (PS) -35776 + (NN) 2866 + (LL) 5540
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -10057.0 ( -3.46 by residue)
QMean score : 0.102
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