Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDY--------TLRRRSLL-AEVYSGRTGVSEVCDANPYLLRAAKFHGKPSRVI---CPICRKEQLTLVSWVFGEHLGAVSGSARTAEELILLATRFSEFAVHVVEVCRTCSWNHLVKSYVLGAARPARPPRGSGGTRTARNGARTASE
1QGT Chain:A ((1-142))
MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMTLATWV-GNNLEDPASRDLVVNYVNTNMGLKIRQLLWFHISCLTFG-RETVLEYLVSFGVWIRTPPAYRPPNAPILST-----
General information:
TITO was launched using:
RESULT:
Template:
1QGT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23867 for 795 contacts (-30.0/contact) +
2D Compatibility (PS) -13288 + (NN) 188 + (LL) 660
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -39407.0 ( -49.57 by residue)
QMean score : 0.214
(partial model without unconserved sides chains):
PDB file :
Tito_1QGT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QGT-query.scw
PDB file :
Tito_Scwrl_1QGT.pdb
: